| ZKO number |
ZKO351 |
| Recent progress of this line |
F2 individuals have been indentified
|
|
Gene name |
fam114a1
|
|
Ensembl ID |
ENSDARG00000008287
|
|
Zebrafish strain |
AB
|
|
Cas9 target site 1 sequence |
sense strand
GGAGTAGTTGGGGATCCTGGggg
|
|
Cas9 target site 2 sequence |
|
|
Position in the gene |
Exon 3
|
|
Restriction enzyme (RE) |
Sty D4I(|CCNGG)
|
|
PCR primer (forward) |
TGCTAGAAGACAAACCAGA
|
|
PCR primer (reverse) |
ACCTAATTTACAGTCCCAAT
|
|
Length of expected PCR product (bp)
|
439
|
|
Length of expected RE digestion product (bp) |
163+62+214
|
|
Plasmids used for making Cas9 mRNA |
pXT7-hCAS9
|
| Plasmids?used?for?making?gRNA |
pMD19T-gRNA
|
| Primers?used?for?making?gRNA |
Pr-ZKO 351
|
|
Dosage of injected Cas9 mRNA (ng/ul)
|
300
|
|
Dosage of injected gRNA (ng/ul)
|
30
|
|
Survival rate of F0 embryo @ 1dpf (%)
|
94
|
|
Method to estimate mutation efficiency |
Restriction enzyme digestionRE digestion (Sty D4I)
|
|
Stage of the embryos collected for mutation detection |
http://www.zfish.cn/upload/file/ZKOPDF/ZKO351.pdf
|
|
Mutation efficiency in F0 embryos (%)
|
40
|
Picture?from?F0?embryos
? (gel?picture?or?sequencing?picture) |
|
|
Mutation type
|
Indel
|
|
Germline transmission efficiency in adult F0
|
25%(2/8)
|
|
Wild-type (WT) sequence
|
GGAGTAGTTGGGGATCCTGGGGGAAGA
|
Germline mutations in selected F0
(By screening F1 embryos) |
F0-1 |
|
|
F0-2
|
|
Mosaicism in selected F0
(By screening F1 adults) |
F0-1
|
GGAGTAGTTGGGGATC-TGGGGGAAGA(-1bp)
|
|
F0-2
|
GGAGTAGTTGGGG---------GAAGA(-9bp)
|
|
Allele name and predicted product
|
351a
351b |
GGAGTAGTTGGGGATC-TGGGGGAAGA; Truncated protein(118aa)
|
| GGAGTAGTTGGGG---------GAAGA; Truncated protein(543aa) |
|
突变创建时间 |
2014-04-17
|
|
填表时间 |
2013/12/18
|
|
修改时间 |
2016/8/8
|
|
PI/负责人 (工作单位) |
|
